Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein ytid | AM446_RS29335 | Not Available | Negative | 4300685 - 4300828 | 5511.39 |
| yjfz/yjic family protein | AM446_RS23825 | Not Available | Positive | 4301162 - 4301992 | 30594.6 |
| uxu operon transcriptional regulator | AM446_RS23830 | Not Available | Negative | 4302133 - 4302906 | 29309.9 |
| fructuronate reductase | AM446_RS23840 | Not Available | Negative | 4303121 - 4304581 | 53583.2 |
| mannonate dehydratase | AM446_RS23845 | Not Available | Negative | 4304662 - 4305846 | 44840.5 |
| gluconate permease gntp | AM446_RS23855 | Not Available | Positive | 4306186 - 4307529 | 47141.0 |
| type 1 fimbria d-mannose specific adhesin fimh | AM446_RS23860 | Not Available | Negative | 4307772 - 4308674 | 31475.2 |
| fimbrial protein | AM446_RS23865 | Not Available | Negative | 4308694 - 4309137 | 15187.5 |
| type 1 fimbria minor subunit fimf | AM446_RS23870 | Not Available | Negative | 4309210 - 4309740 | 18716.3 |
| fimbrial usher fimd | AM446_RS23875 | Not Available | Negative | 4309750 - 4312386 | 96483.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





