Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3343 domain-containing protein | AM446_RS23775 | Not Available | Positive | 4293558 - 4293815 | 9554.6 |
| sdia-regulated domain-containing protein | AM446_RS23780 | Not Available | Positive | 4293880 - 4294740 | 32025.2 |
| mfs transporter | AM446_RS23785 | Not Available | Positive | 4294808 - 4295986 | 41301.1 |
| sugar transporter | AM446_RS23790 | Not Available | Negative | 4295999 - 4296552 | 20460.8 |
| nucleoside recognition domain-containing protein | AM446_RS23795 | Not Available | Positive | 4296802 - 4297485 | 23794.8 |
| yjig family protein | AM446_RS23800 | Not Available | Positive | 4297482 - 4297943 | 16194.5 |
| beta-aspartyl-peptidase | AM446_RS23805 | Not Available | Positive | 4297956 - 4299128 | 41116.4 |
| hypochlorite stress dna-binding transcriptional regulator hypt | AM446_RS23810 | Not Available | Positive | 4299193 - 4300104 | 34712.7 |
| anti-adapter protein irad | AM446_RS23815 | Not Available | Negative | 4300097 - 4300489 | 14747.7 |
| irad leader peptide idlp | AM446_RS28700 | Not Available | Negative | 4300486 - 4300569 | 3016.48 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





