Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| purine-nucleoside phosphorylase | AM446_RS23525 | Not Available | Negative | 4241082 - 4241801 | 25951.4 |
| phosphopentomutase | AM446_RS23530 | Not Available | Negative | 4241858 - 4243081 | 44372.4 |
| thymidine phosphorylase | AM446_RS23535 | Not Available | Negative | 4243133 - 4244455 | 47182.9 |
| deoxyribose-phosphate aldolase | AM446_RS23540 | Not Available | Negative | 4244533 - 4245312 | 27749.3 |
| yjji family glycine radical enzyme | AM446_RS23545 | Not Available | Positive | 4245570 - 4247120 | 58046.3 |
| yjjw family glycine radical enzyme activase | AM446_RS23550 | Not Available | Positive | 4247092 - 4247955 | 31428.3 |
| metal-dependent hydrolase | AM446_RS23555 | Not Available | Negative | 4248072 - 4248851 | 28880.7 |
| patatin family protein | AM446_RS23560 | Not Available | Negative | 4248848 - 4249921 | 39850.1 |
| duf1328 domain-containing protein | AM446_RS23565 | Not Available | Negative | 4250043 - 4250204 | 5536.27 |
| molecular chaperone osmy | AM446_RS23570 | Not Available | Negative | 4250331 - 4250936 | 21074.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





