Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate reductase | AM446_RS23210 | Not Available | Negative | 4181579 - 4182400 | 28758.3 |
| duf805 domain-containing protein | AM446_RS23215 | Not Available | Negative | 4182561 - 4182926 | 13617.8 |
| ribonucleoside hydrolase rihc | AM446_RS23220 | Not Available | Negative | 4182948 - 4183862 | 32662.8 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | AM446_RS23225 | Not Available | Negative | 4183928 - 4184878 | 34776.6 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | AM446_RS23230 | Not Available | Negative | 4184880 - 4185329 | 16096.0 |
| signal peptidase ii | AM446_RS23235 | Not Available | Negative | 4185417 - 4185911 | 18129.3 |
| isoleucine--trna ligase | AM446_RS23240 | Not Available | Negative | 4185911 - 4188727 | 104229.0 |
| bifunctional riboflavin kinase/fad synthetase | AM446_RS23245 | Not Available | Negative | 4188770 - 4189711 | 34736.4 |
| duf2575 family protein | AM446_RS23250 | Not Available | Negative | 4189719 - 4189937 | 7890.84 |
| 30s ribosomal protein s20 | AM446_RS23255 | Not Available | Positive | 4190040 - 4190303 | 9684.94 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





