Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase-associated protein rapa | AM446_RS23055 | Not Available | Positive | 4146972 - 4149878 | 109775.0 |
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | AM446_RS23060 | Not Available | Positive | 4149890 - 4150549 | 24862.1 |
| sugar transporter | AM446_RS23065 | Not Available | Positive | 4150762 - 4150940 | 6229.42 |
| t3ss effector espy1 | AM446_RS23070 | Not Available | Negative | 4150957 - 4151715 | 28306.3 |
| co-chaperone djla | AM446_RS23075 | Not Available | Negative | 4152010 - 4152825 | 30567.2 |
| lps assembly protein lptd | AM446_RS23080 | Not Available | Positive | 4153080 - 4155434 | 89689.8 |
| peptidylprolyl isomerase sura | AM446_RS23085 | Not Available | Positive | 4155487 - 4156773 | 47286.5 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | AM446_RS23090 | Not Available | Positive | 4156773 - 4157762 | 35184.0 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | AM446_RS23095 | Not Available | Positive | 4157759 - 4158580 | 30422.0 |
| co2+/mg2+ efflux protein apag | AM446_RS23100 | Not Available | Positive | 4158583 - 4158960 | 13867.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





