Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| t3ss effector espy2 | AM446_RS23000 | Not Available | Negative | 4133933 - 4134502 | 21527.2 |
| thiamine abc transporter substrate binding subunit | AM446_RS23005 | Not Available | Positive | 4134873 - 4135856 | 36273.3 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | AM446_RS23010 | Not Available | Positive | 4135832 - 4137442 | 59404.6 |
| thiamine abc transporter atp-binding protein thiq | AM446_RS23015 | Not Available | Positive | 4137426 - 4138124 | 25001.6 |
| deda family protein | AM446_RS23020 | Not Available | Negative | 4138238 - 4139002 | 28171.7 |
| arabinose operon transcriptional regulator arac | AM446_RS23025 | Not Available | Negative | 4139088 - 4139966 | 33385.8 |
| ribulokinase | AM446_RS23035 | Not Available | Positive | 4140305 - 4142005 | 61189.7 |
| l-arabinose isomerase | AM446_RS23040 | Not Available | Positive | 4142016 - 4143518 | 56092.1 |
| l-ribulose-5-phosphate 4-epimerase | AM446_RS23045 | Not Available | Positive | 4143687 - 4144382 | 25513.4 |
| dna polymerase ii | AM446_RS23050 | Not Available | Positive | 4144457 - 4146808 | 89996.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





