Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i methionyl aminopeptidase | AM446_RS22485 | Not Available | Positive | 4022235 - 4023029 | 29332.5 |
| bifunctional uridylyltransferase/uridylyl-removing protein glnd | AM446_RS22490 | Not Available | Positive | 4023091 - 4025763 | 102419.0 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | AM446_RS22495 | Not Available | Positive | 4025794 - 4026618 | 29892.8 |
| duf3461 family protein | AM446_RS22500 | Not Available | Positive | 4026932 - 4027318 | 15097.0 |
| dna-binding transcriptional regulator cdar | AM446_RS22505 | Not Available | Negative | 4027372 - 4028529 | 43660.1 |
| serine endoprotease degp | AM446_RS22510 | Not Available | Negative | 4028684 - 4030108 | 49371.3 |
| dgtpase | AM446_RS22520 | Not Available | Negative | 4030238 - 4031755 | 59398.2 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | AM446_RS22525 | Not Available | Positive | 4031839 - 4032537 | 24355.4 |
| vitamin b12 abc transporter substrate-binding protein btuf | AM446_RS22530 | Not Available | Positive | 4032530 - 4033330 | 29352.4 |
| tric cation channel family protein | AM446_RS22535 | Not Available | Positive | 4033368 - 4033991 | 22129.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





