Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AM446_RS22230 | Not Available | Negative | 3973573 - 3974358 | 29668.2 |
| Trna-asp | Not Available | Not Available | Positive | 3974688 - 3974764 | Not Available |
| dna polymerase iii subunit epsilon | AM446_RS22240 | Not Available | Negative | 3974897 - 3975628 | 27130.5 |
| ribonuclease hi | AM446_RS22245 | Not Available | Positive | 3975693 - 3976160 | 17597.9 |
| class i sam-dependent methyltransferase | AM446_RS22250 | Not Available | Negative | 3976157 - 3976879 | 27212.7 |
| hydroxyacylglutathione hydrolase | AM446_RS22255 | Not Available | Positive | 3976913 - 3977668 | 28473.1 |
| murein transglycosylase d | AM446_RS22260 | Not Available | Positive | 3977740 - 3979098 | 49420.3 |
| class i sam-dependent methyltransferase | AM446_RS22265 | Not Available | Negative | 3979145 - 3979915 | 28271.3 |
| endonuclease/exonuclease/phosphatase family protein | AM446_RS22270 | Not Available | Negative | 3979993 - 3980793 | 29993.4 |
| dna-binding transcriptional regulator yafc | AM446_RS22275 | Not Available | Positive | 3981034 - 3981948 | 33738.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





