Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssk | AM446_RS22180 | Not Available | Positive | 3959345 - 3960676 | 49965.8 |
| type ivb secretion system protein icmh/dotu | AM446_RS22185 | Not Available | Positive | 3960681 - 3961442 | 29373.7 |
| aaa family atpase | AM446_RS22190 | Not Available | Positive | 3961451 - 3964420 | 108298.0 |
| type vi secretion system-associated protein vasi | AM446_RS22195 | Not Available | Positive | 3964417 - 3965160 | 26423.7 |
| type vi secretion system protein tssa | AM446_RS22200 | Not Available | Positive | 3965165 - 3966577 | 52281.0 |
| type vi secretion system membrane subunit tssm | AM446_RS22205 | Not Available | Positive | 3966686 - 3970120 | 130879.0 |
| sugar transporter | AM446_RS22210 | Not Available | Positive | 3970131 - 3971580 | 54337.1 |
| hcp family type vi secretion system effector | AM446_RS22215 | Not Available | Positive | 3971507 - 3971989 | 18034.6 |
| hypothetical protein | AM446_RS22220 | Not Available | Positive | 3972033 - 3972947 | 34000.4 |
| protein ykfm | AM446_RS22225 | Not Available | Positive | 3972957 - 3973424 | 17688.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





