Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system tip protein vgrg | AM446_RS22125 | Not Available | Negative | 3948345 - 3950486 | 79525.8 |
| hcp family type vi secretion system effector | AM446_RS22135 | Not Available | Negative | 3950696 - 3951214 | 19256.8 |
| type vi secretion system contractile sheath small subunit | AM446_RS22140 | Not Available | Positive | 3951911 - 3952411 | 18005.4 |
| hypothetical protein | AM446_RS22145 | Not Available | Positive | 3952446 - 3952670 | 8476.09 |
| type vi secretion system contractile sheath large subunit | AM446_RS22150 | Not Available | Positive | 3952721 - 3954196 | 55767.1 |
| type vi secretion system baseplate subunit tsse | AM446_RS22155 | Not Available | Positive | 3954203 - 3954616 | 15455.0 |
| type vi secretion system baseplate subunit tssf | AM446_RS22160 | Not Available | Positive | 3954620 - 3956470 | 71102.8 |
| type vi secretion system baseplate subunit tssg | AM446_RS22165 | Not Available | Positive | 3956434 - 3957516 | 40258.1 |
| type vi secretion system-associated fha domain protein tagh | AM446_RS22170 | Not Available | Positive | 3957541 - 3958821 | 47484.9 |
| type vi secretion system lipoprotein tssj | AM446_RS22175 | Not Available | Positive | 3958818 - 3959342 | 19395.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





