Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan meso-diaminopimelic acid protein amidase | AM446_RS22070 | Not Available | Positive | 3935319 - 3936059 | 28022.8 |
| class ii glutamine amidotransferase | AM446_RS22075 | Not Available | Negative | 3936030 - 3936797 | 28637.2 |
| d-sedoheptulose 7-phosphate isomerase | AM446_RS22080 | Not Available | Negative | 3936913 - 3937491 | 20816.0 |
| acyl-coa dehydrogenase fade | AM446_RS22085 | Not Available | Positive | 3937731 - 3940175 | 89201.6 |
| ivy family c-type lysozyme inhibitor | AM446_RS22090 | Not Available | Negative | 3940218 - 3940664 | 15996.1 |
| 2-oxoglutaramate amidase | AM446_RS22095 | Not Available | Positive | 3940845 - 3941615 | 28972.5 |
| sugar transporter | AM446_RS22100 | Not Available | Negative | 3941710 - 3942021 | 12206.7 |
| sugar transporter | AM446_RS22105 | Not Available | Negative | 3942040 - 3943172 | 41821.6 |
| hypothetical protein | AM446_RS22115 | Not Available | Negative | 3943393 - 3943770 | 14109.8 |
| rhs element core protein | AM446_RS22120 | Not Available | Negative | 3943770 - 3948269 | 167053.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





