Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ecp biosynthesis operon dna-binding transcriptional regulator ecpr | AM446_RS21860 | Not Available | Positive | 3896220 - 3896762 | 21200.7 |
| common pilus major fimbrillin subunit ecpa | AM446_RS21865 | Not Available | Positive | 3896837 - 3897424 | 20082.4 |
| fimbrial chaperone ecpb | AM446_RS21870 | Not Available | Positive | 3897482 - 3898150 | 24521.3 |
| fimbrial usher ecpc | AM446_RS21875 | Not Available | Positive | 3898176 - 3900701 | 91286.7 |
| fimbrial adhesin ecpd | AM446_RS21880 | Not Available | Positive | 3900691 - 3902334 | 59862.0 |
| fimbrial chaperone ecpe | AM446_RS21885 | Not Available | Positive | 3902303 - 3903013 | 26660.7 |
| ykgj family cysteine cluster protein | AM446_RS21890 | Not Available | Positive | 3903327 - 3903656 | 11799.1 |
| yagu family protein | AM446_RS21900 | Not Available | Negative | 3903905 - 3904519 | 22968.1 |
| aldehyde dehydrogenase iron-sulfur subunit paoa | AM446_RS21910 | Not Available | Positive | 3904926 - 3905615 | 24429.2 |
| aldehyde oxidoreductase fad-binding subunit paob | AM446_RS21915 | Not Available | Positive | 3905612 - 3906568 | 33888.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





