Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| taurine dioxygenase | AM446_RS21425 | Not Available | Negative | 3807357 - 3808208 | 32400.3 |
| taurine abc transporter permease tauc | AM446_RS21430 | Not Available | Negative | 3808205 - 3809032 | 29567.6 |
| taurine abc transporter atp-binding subunit | AM446_RS21435 | Not Available | Negative | 3809029 - 3809796 | 28325.6 |
| taurine abc transporter substrate-binding protein | AM446_RS21440 | Not Available | Negative | 3809809 - 3810771 | 34239.8 |
| pig-l deacetylase family protein | AM446_RS21445 | Not Available | Positive | 3811380 - 3812051 | 25041.2 |
| glycosyltransferase | AM446_RS21450 | Not Available | Positive | 3812061 - 3813257 | 44645.9 |
| acetyltransferase | AM446_RS21455 | Not Available | Positive | 3813235 - 3813816 | 20773.3 |
| yaio family outer membrane beta-barrel protein | AM446_RS21460 | Not Available | Positive | 3813818 - 3814591 | 29058.8 |
| formaldehyde-responsive transcriptional repressor frmr | AM446_RS21465 | Not Available | Positive | 3814776 - 3815051 | 10318.3 |
| s-(hydroxymethyl)glutathione dehydrogenase | AM446_RS21470 | Not Available | Positive | 3815086 - 3816195 | 39335.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





