Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-hairpin-helix domain-containing protein | AM446_RS20980 | Not Available | Negative | 3724791 - 3725162 | 12716.4 |
| peptidylprolyl isomerase | AM446_RS20985 | Not Available | Negative | 3725313 - 3727184 | 68153.7 |
| nucleoid-associated protein hu-beta | AM446_RS20990 | Not Available | Negative | 3727376 - 3727648 | 9226.08 |
| endopeptidase la | AM446_RS20995 | Not Available | Negative | 3727857 - 3730211 | 87443.4 |
| atp-dependent protease atp-binding subunit clpx | AM446_RS21000 | Not Available | Negative | 3730399 - 3731673 | 46358.7 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | AM446_RS21005 | Not Available | Negative | 3731799 - 3732422 | 23188.1 |
| is200/is605-like element is200c family transposase | AM446_RS21010 | Not Available | Negative | 3732714 - 3733172 | 18028.0 |
| trigger factor | AM446_RS21020 | Not Available | Negative | 3733380 - 3734678 | 48195.4 |
| transcriptional regulator bola | AM446_RS21030 | Not Available | Negative | 3735022 - 3735339 | 11994.3 |
| lipoprotein | AM446_RS21035 | Not Available | Positive | 3735644 - 3736222 | 20969.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





