Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional repressor allr | AM446_RS20605 | Not Available | Negative | 3626487 - 3627302 | 29271.4 |
| ureidoglycolate lyase | AM446_RS20610 | Not Available | Negative | 3627380 - 3627862 | 18223.6 |
| hth-type transcriptional activator alls | AM446_RS20615 | Not Available | Positive | 3628092 - 3629018 | 34513.6 |
| trna 2-selenouridine(34) synthase mnmh | AM446_RS20620 | Not Available | Positive | 3629087 - 3630181 | 41198.3 |
| sugar transporter | AM446_RS20625 | Not Available | Positive | 3630297 - 3630662 | 13797.5 |
| hypothetical protein | AM446_RS20630 | Not Available | Negative | 3631183 - 3631674 | 18385.1 |
| is1 family transposase | AM446_RS20640 | Not Available | Negative | 3631758 - 3632455 | 26631.4 |
| rhs element core protein | AM446_RS20645 | Not Available | Negative | 3632506 - 3636633 | 154942.0 |
| putative abc transporter permease subunit ybbp | AM446_RS20650 | Not Available | Negative | 3637062 - 3639476 | 89495.7 |
| putative abc transporter atp-binding protein ybba | AM446_RS20655 | Not Available | Negative | 3639473 - 3640159 | 24534.5 |
Pathways
904 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





