Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar transporter | AM446_RS20555 | Not Available | Positive | 3614046 - 3615095 | 37721.1 |
| allantoate deiminase | AM446_RS20560 | Not Available | Positive | 3615117 - 3616352 | 45618.5 |
| (s)-ureidoglycine aminohydrolase | AM446_RS20565 | Not Available | Positive | 3616363 - 3617148 | 28750.0 |
| glycerate 3-kinase | AM446_RS20570 | Not Available | Negative | 3617278 - 3618423 | 38836.1 |
| uracil/xanthine transporter | AM446_RS20575 | Not Available | Negative | 3618445 - 3619746 | 47232.2 |
| allantoinase allb | AM446_RS20580 | Not Available | Negative | 3619803 - 3621164 | 49549.4 |
| allantoin transporter | AM446_RS20585 | Not Available | Negative | 3621225 - 3622679 | 52435.2 |
| 2-hydroxy-3-oxopropionate reductase | AM446_RS20590 | Not Available | Negative | 3622849 - 3623727 | 30787.5 |
| hydroxypyruvate isomerase | AM446_RS20595 | Not Available | Negative | 3623827 - 3624603 | 29357.0 |
| glyoxylate carboligase | AM446_RS20600 | Not Available | Negative | 3624616 - 3626397 | 64764.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





