Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator envy | AM446_RS20445 | Not Available | Positive | 3594839 - 3595600 | 29007.4 |
| Trna-arg | Not Available | Not Available | Positive | 3595646 - 3595722 | Not Available |
| fimbria biosynthesis transcriptional regulator fimz | AM446_RS20460 | Not Available | Positive | 3595965 - 3596597 | 23678.9 |
| fimbria assembly protein | AM446_RS20465 | Not Available | Negative | 3596600 - 3597115 | 18153.5 |
| type 1 fimbria d-mannose specific adhesin fimh | AM446_RS20470 | Not Available | Negative | 3597126 - 3598133 | 36579.0 |
| fimbrial biogenesis usher protein | AM446_RS20475 | Not Available | Negative | 3598146 - 3600755 | 96002.6 |
| type 1 fimbria chaperone fimc | AM446_RS20480 | Not Available | Negative | 3600786 - 3601478 | 25517.2 |
| type 1 fimbrial major subunit fima | AM446_RS20485 | Not Available | Negative | 3601698 - 3602240 | 18475.5 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | AM446_RS20490 | Not Available | Positive | 3602711 - 3603577 | 31015.6 |
| ribosome-associated protein ybcj | AM446_RS20495 | Not Available | Positive | 3603579 - 3603791 | 7403.98 |
Pathways
860 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





