Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps assembly lipoprotein lpte | AM446_RS19975 | Not Available | Positive | 3498235 - 3498816 | 21357.8 |
| dna polymerase iii subunit delta | AM446_RS19980 | Not Available | Positive | 3498816 - 3499847 | 38690.0 |
| nicotinate-nucleotide adenylyltransferase | AM446_RS19985 | Not Available | Positive | 3499849 - 3500490 | 24529.3 |
| adenosylcobalamin/alpha-ribazole phosphatase | AM446_RS19990 | Not Available | Positive | 3500514 - 3501125 | 23410.9 |
| ribosome silencing factor | AM446_RS19995 | Not Available | Positive | 3501385 - 3501702 | 11582.9 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | AM446_RS20000 | Not Available | Positive | 3501706 - 3502173 | 17342.1 |
| peptidoglycan dd-transpeptidase mrda | AM446_RS20005 | Not Available | Positive | 3502204 - 3504105 | 70860.6 |
| peptidoglycan glycosyltransferase mrdb | AM446_RS20010 | Not Available | Positive | 3504108 - 3505220 | 40478.6 |
| endolytic peptidoglycan transglycosylase rlpa | AM446_RS20015 | Not Available | Positive | 3505231 - 3506319 | 37557.1 |
| d-alanyl-d-alanine carboxypeptidase daca | AM446_RS20020 | Not Available | Positive | 3506459 - 3507670 | 44446.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





