Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is200/is605-like element is200c family transposase | AM446_RS17655 | Not Available | Negative | 3058033 - 3058491 | 18028.0 |
| lysr substrate-binding domain-containing protein | AM446_RS17665 | Not Available | Negative | 3058752 - 3059681 | 34152.0 |
| sdr family oxidoreductase | AM446_RS17670 | Not Available | Negative | 3059727 - 3060551 | 29709.8 |
| type ii toxin-antitoxin system mrna interferase toxin yoeb | AM446_RS17675 | Not Available | Negative | 3060634 - 3060888 | 10216.1 |
| yoeb-yefm toxin-antitoxin system antitoxin yefm | AM446_RS17680 | Not Available | Negative | 3060885 - 3061136 | 9308.13 |
| his operon leader peptide | AM446_RS17685 | Not Available | Positive | 3061419 - 3061469 | 2081.43 |
| atp phosphoribosyltransferase | AM446_RS17695 | Not Available | Positive | 3061615 - 3062514 | 33315.7 |
| histidinol dehydrogenase | AM446_RS17700 | Not Available | Positive | 3062520 - 3063824 | 46107.8 |
| histidinol-phosphate transaminase | AM446_RS17705 | Not Available | Positive | 3063821 - 3064891 | 39376.4 |
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisb | AM446_RS17710 | Not Available | Positive | 3064891 - 3065958 | 40276.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





