Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | AM446_RS16290 | Not Available | Negative | 2827221 - 2827862 | 22285.3 |
| phosphogluconate dehydratase | AM446_RS16295 | Not Available | Negative | 2827899 - 2829710 | 64642.9 |
| glucose-6-phosphate dehydrogenase | AM446_RS16300 | Not Available | Negative | 2829945 - 2831420 | 55707.5 |
| dna-binding transcriptional regulator hexr | AM446_RS16305 | Not Available | Positive | 2831758 - 2832627 | 31959.3 |
| pyruvate kinase | AM446_RS16310 | Not Available | Positive | 2832755 - 2834197 | 51360.3 |
| lauroyl-kdo(2)-lipid iv(a) myristoyltransferase | AM446_RS16315 | Not Available | Negative | 2834329 - 2835300 | 37412.5 |
| murein dd-endopeptidase mepm | AM446_RS16320 | Not Available | Negative | 2835419 - 2836741 | 49060.6 |
| zinc abc transporter substrate-binding protein znua | AM446_RS16325 | Not Available | Negative | 2836757 - 2837689 | 33904.4 |
| zinc abc transporter atp-binding protein znuc | AM446_RS16330 | Not Available | Positive | 2837768 - 2838523 | 27927.3 |
| zinc abc transporter permease subunit znub | AM446_RS16335 | Not Available | Positive | 2838520 - 2839305 | 27792.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





