Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | AM446_RS14215 | Not Available | Negative | 2436696 - 2437637 | 34401.1 |
| abc transporter atp-binding protein | AM446_RS14220 | Not Available | Negative | 2437638 - 2438651 | 37033.9 |
| putative abc transporter substrate-binding protein ydcs | AM446_RS14225 | Not Available | Negative | 2438669 - 2439814 | 42400.5 |
| plp-dependent aminotransferase family protein | AM446_RS14230 | Not Available | Negative | 2440059 - 2441465 | 52743.8 |
| type ii toxin-antitoxin system antitoxin hicb | AM446_RS14235 | Not Available | Negative | 2441544 - 2441960 | 15247.5 |
| type ii toxin-antitoxin system mrna interferase toxin hica | AM446_RS14240 | Not Available | Negative | 2442006 - 2442182 | 6801.35 |
| yncj family protein | AM446_RS14245 | Not Available | Positive | 2442404 - 2442634 | 8741.39 |
| 23s rrna 5-hydroxycytidine c2501 synthase | AM446_RS14250 | Not Available | Negative | 2442726 - 2444687 | 72794.1 |
| dna-binding transcriptional regulator sutr | AM446_RS14255 | Not Available | Negative | 2444760 - 2445296 | 19653.2 |
| bene family transporter ydco | AM446_RS14260 | Not Available | Positive | 2445388 - 2446560 | 40477.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





