Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide assembly protein lapa | AM446_RS12820 | Not Available | Positive | 2164647 - 2164955 | 11324.1 |
| lipopolysaccharide assembly protein lapb | AM446_RS12825 | Not Available | Positive | 2164962 - 2166131 | 44533.6 |
| orotidine-5'-phosphate decarboxylase | AM446_RS12830 | Not Available | Positive | 2166322 - 2167059 | 26275.6 |
| stress response translation initiation inhibitor ycih | AM446_RS12835 | Not Available | Positive | 2167059 - 2167385 | 11420.0 |
| osmotically-inducible lipoprotein osmb | AM446_RS12840 | Not Available | Negative | 2167511 - 2167729 | 6948.51 |
| dna-binding transcriptional regulator ycit | AM446_RS12845 | Not Available | Negative | 2167998 - 2168747 | 27590.2 |
| protein yciz | AM446_RS12850 | Not Available | Negative | 2168837 - 2169010 | 6441.71 |
| protein ymid | AM446_RS28915 | Not Available | Positive | 2169047 - 2169175 | 5077.28 |
| cyclic di-gmp phosphodiesterase | AM446_RS12855 | Not Available | Negative | 2169157 - 2171142 | 74784.4 |
| hypothetical protein | AM446_RS12860 | Not Available | Positive | 2171196 - 2171300 | 4122.21 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





