Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph-dependent ferric chelate reductase nfef | DL545_RS04290 | Not Available | Positive | 791354 - 792118 | 29033.3 |
| Trna-met | Not Available | Not Available | Positive | 792171 - 792246 | Not Available |
| g/u mismatch-specific dna glycosylase | DL545_RS04300 | Not Available | Positive | 792371 - 792877 | 18674.5 |
| rna polymerase sigma factor rpod | DL545_RS04305 | Not Available | Negative | 792956 - 794797 | 70211.2 |
| dna primase | DL545_RS04315 | Not Available | Negative | 794992 - 796737 | 65568.5 |
| 30s ribosomal protein s21 | DL545_RS04320 | Not Available | Negative | 796848 - 797063 | 8500.42 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | DL545_RS04330 | Not Available | Positive | 797301 - 798314 | 36010.5 |
| l-tartrate/succinate antiporter | DL545_RS04335 | Not Available | Negative | 798357 - 799820 | 52857.5 |
| l(+)-tartrate dehydratase subunit beta | DL545_RS04340 | Not Available | Negative | 799868 - 800473 | 22680.8 |
| l(+)-tartrate dehydratase subunit alpha | DL545_RS04345 | Not Available | Negative | 800470 - 801381 | 32664.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





