Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional activator tdcr | DL545_RS27315 | Not Available | Negative | 735757 - 735975 | 8574.2 |
| transcriptional regulator tdca | DL545_RS04020 | Not Available | Positive | 736290 - 737228 | 34540.9 |
| bifunctional threonine ammonia-lyase/l-serine ammonia-lyase tdcb | DL545_RS04030 | Not Available | Positive | 737327 - 738316 | 35234.5 |
| threonine/serine transporter tdcc | DL545_RS04035 | Not Available | Positive | 738338 - 739669 | 48895.8 |
| propionate kinase | DL545_RS04040 | Not Available | Positive | 739695 - 740903 | 43372.7 |
| 2-ketobutyrate formate-lyase/pyruvate formate-lyase | DL545_RS04045 | Not Available | Positive | 740937 - 743231 | 85940.4 |
| enamine/imine deaminase | DL545_RS04050 | Not Available | Positive | 743245 - 743634 | 14068.0 |
| l-serine ammonia-lyase | DL545_RS04055 | Not Available | Positive | 743706 - 745070 | 48466.5 |
| amino acid permease | DL545_RS04065 | Not Available | Positive | 745345 - 746676 | 48317.6 |
| cysteine desulfidase | DL545_RS04070 | Not Available | Positive | 746704 - 748014 | 45361.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





