Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein yrbn | DL545_RS03805 | Not Available | Positive | 697057 - 697137 | 2979.59 |
| atp-dependent rna helicase dead | DL545_RS03810 | Not Available | Positive | 697130 - 699019 | 70550.5 |
| tryptophan permease | DL545_RS03815 | Not Available | Positive | 699173 - 700417 | 44379.2 |
| luciferase-like monooxygenase | DL545_RS03820 | Not Available | Negative | 700535 - 701542 | 37108.4 |
| u32 family peptidase | DL545_RS03825 | Not Available | Negative | 701748 - 702626 | 32537.1 |
| ubiquinone anaerobic biosynthesis protein ubiu | DL545_RS03830 | Not Available | Negative | 702635 - 703630 | 37035.2 |
| ubiquinone anaerobic biosynthesis accessory factor ubit | DL545_RS03835 | Not Available | Positive | 703839 - 704363 | 19686.0 |
| gnat family n-acetyltransferase | DL545_RS03840 | Not Available | Positive | 704357 - 704860 | 18534.8 |
| dna damage response exodeoxyribonuclease yhbq | DL545_RS03845 | Not Available | Negative | 704847 - 705149 | 11242.5 |
| yhbp family protein | DL545_RS03850 | Not Available | Positive | 705200 - 705643 | 16777.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





