Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase factor sigma-54 | DL545_RS03605 | Not Available | Negative | 658841 - 660274 | 53996.8 |
| lps export abc transporter atp-binding protein | DL545_RS03610 | Not Available | Negative | 660322 - 661047 | 26802.3 |
| lipopolysaccharide abc transporter substrate-binding protein lpta | DL545_RS03615 | Not Available | Negative | 661054 - 661611 | 20128.1 |
| lps export abc transporter periplasmic protein lptc | DL545_RS03620 | Not Available | Negative | 661580 - 662155 | 21703.8 |
| 3-deoxy-manno-octulosonate-8-phosphatase kdsc | DL545_RS03625 | Not Available | Negative | 662152 - 662718 | 20016.3 |
| arabinose-5-phosphate isomerase kdsd | DL545_RS03630 | Not Available | Negative | 662739 - 663725 | 35198.3 |
| calcium/sodium antiporter | DL545_RS03635 | Not Available | Negative | 663739 - 664716 | 34756.9 |
| phospholipid abc transporter atp-binding protein mlaf | DL545_RS03640 | Not Available | Positive | 664926 - 665735 | 29098.6 |
| lipid asymmetry maintenance abc transporter permease subunit mlae | DL545_RS03645 | Not Available | Positive | 665743 - 666525 | 27865.0 |
| outer membrane lipid asymmetry maintenance protein mlad | DL545_RS03650 | Not Available | Positive | 666530 - 667081 | 19577.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





