Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxide/acid stress response protein yhcn | DL545_RS03425 | Not Available | Negative | 626218 - 626481 | 9178.85 |
| transcriptional regulator argr | DL545_RS03430 | Not Available | Negative | 626846 - 627316 | 16995.5 |
| malate dehydrogenase | DL545_RS03435 | Not Available | Positive | 627751 - 628689 | 32339.2 |
| outer membrane-stress sensor serine endopeptidase degs | DL545_RS03440 | Not Available | Negative | 628751 - 629818 | 37583.4 |
| serine endoprotease degq | DL545_RS03445 | Not Available | Negative | 629908 - 631275 | 47207.9 |
| z-ring associated protein zapg | DL545_RS03450 | Not Available | Negative | 631429 - 631827 | 14961.7 |
| cell division protein zape | DL545_RS03455 | Not Available | Positive | 632021 - 633148 | 43075.1 |
| 50s ribosomal protein l13 | DL545_RS03460 | Not Available | Positive | 633367 - 633795 | 16019.5 |
| 30s ribosomal protein s9 | DL545_RS03465 | Not Available | Positive | 633811 - 634203 | 14857.1 |
| stringent starvation protein sspa | DL545_RS03485 | Not Available | Positive | 634598 - 635236 | 24306.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





