Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein mred | DL545_RS03375 | Not Available | Positive | 613424 - 613912 | 18788.9 |
| nucleoside triphosphate pyrophosphatase yhde | DL545_RS03380 | Not Available | Positive | 613921 - 614514 | 21430.6 |
| ribonuclease g | DL545_RS03385 | Not Available | Positive | 614504 - 615973 | 55367.4 |
| asma2 domain-containing protein yhdp | DL545_RS03390 | Not Available | Positive | 616041 - 619841 | 138973.0 |
| metalloprotease tldd | DL545_RS03395 | Not Available | Positive | 619997 - 621442 | 51367.2 |
| hth-type transcriptional activator aaer | DL545_RS03400 | Not Available | Negative | 621570 - 622499 | 34518.1 |
| p-hydroxybenzoic acid efflux pump operon protein aaex | DL545_RS03405 | Not Available | Positive | 622682 - 622885 | 7847.01 |
| p-hydroxybenzoic acid efflux pump subunit aaea | DL545_RS03410 | Not Available | Positive | 622893 - 623825 | 34776.5 |
| p-hydroxybenzoic acid efflux pump subunit aaeb | DL545_RS03415 | Not Available | Positive | 623831 - 625798 | 73672.9 |
| barstar family protein | DL545_RS03420 | Not Available | Positive | 625890 - 626162 | 10766.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





