Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Attl | Not Available | Not Available | Positive | 3283947 - 3283960 | Not Available |
| kinase inhibitor | DL545_RS16950 | Not Available | Positive | 3284711 - 3285187 | 17086.0 |
| Diguanylate cyclase | DL545_RS16960 | Not Available | Positive | 3285933 - 3287264 | 51337.9 |
| Tail fiber assembly protein | DL545_RS27535 | Not Available | Negative | 3287338 - 3287502 | 6173.24 |
| hypothetical protein | DL545_RS27540 | Not Available | Positive | 3287494 - 3287589 | 3643.54 |
| class i sam-dependent methyltransferase | DL545_RS16970 | Not Available | Positive | 3287664 - 3288332 | 24518.5 |
| nucleocapsid protein | DL545_RS27805 | Not Available | Negative | 3288277 - 3288414 | 5264.6 |
| Tail fiber assembly protein | DL545_RS16980 | Not Available | Negative | 3288387 - 3288518 | 5098.0 |
| Side tail fiber protein | DL545_RS16985 | Not Available | Negative | 3288570 - 3289277 | 25596.8 |
| Dna packaging protein | DL545_RS16990 | Not Available | Negative | 3289223 - 3289783 | 21323.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





