Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna dihydrouridine synthase dusb | DL545_RS03310 | Not Available | Negative | 601054 - 602019 | 35868.2 |
| 50s ribosomal protein l11 methyltransferase | DL545_RS03315 | Not Available | Negative | 602348 - 603229 | 31906.9 |
| sodium/pantothenate symporter | DL545_RS03320 | Not Available | Negative | 603241 - 604692 | 51706.3 |
| yhdt family protein | DL545_RS03325 | Not Available | Negative | 604682 - 604924 | 9090.24 |
| acetyl-coa carboxylase biotin carboxylase subunit | DL545_RS03330 | Not Available | Negative | 605033 - 606382 | 49323.7 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | DL545_RS03335 | Not Available | Negative | 606393 - 606863 | 16688.2 |
| mdr family oxidoreductase | DL545_RS03345 | Not Available | Negative | 607841 - 608815 | 34771.9 |
| rnase e specificity factor csrd | DL545_RS03350 | Not Available | Positive | 608967 - 610907 | 73345.6 |
| rod shape-determining protein mreb | DL545_RS03365 | Not Available | Positive | 611212 - 612255 | 36984.8 |
| rod shape-determining protein mrec | DL545_RS03370 | Not Available | Positive | 612321 - 613424 | 39562.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





