Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system minor pseudopilin gspi | DL545_RS02950 | Not Available | Negative | 549938 - 550315 | 13902.2 |
| type ii secretion system minor pseudopilin gsph | DL545_RS02955 | Not Available | Negative | 550312 - 550821 | 18623.1 |
| type ii secretion system major pseudopilin gspg | DL545_RS02960 | Not Available | Negative | 550829 - 551266 | 15934.2 |
| type ii secretion system inner membrane protein gspf | DL545_RS02965 | Not Available | Negative | 551276 - 552472 | 44341.9 |
| type ii secretion system atpase gspe | DL545_RS02970 | Not Available | Negative | 552469 - 553950 | 54583.9 |
| type ii secretion system secretin gspd | DL545_RS02975 | Not Available | Negative | 553960 - 555912 | 70683.2 |
| type ii secretion system protein gspc | DL545_RS02980 | Not Available | Negative | 555896 - 556711 | 30049.9 |
| type ii secretion system protein gspa | DL545_RS02985 | Not Available | Positive | 556891 - 558360 | 55301.1 |
| putative general secretion pathway protein gspb | DL545_RS02990 | Not Available | Positive | 558362 - 558781 | 15862.8 |
| 30s ribosomal protein s10 | DL545_RS02995 | Not Available | Positive | 559019 - 559330 | 11736.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





