Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor g | DL545_RS02895 | Not Available | Positive | 538775 - 540889 | 77585.8 |
| elongation factor tu | DL545_RS02900 | Not Available | Positive | 540960 - 542144 | 43286.1 |
| bifunctional chitinase/lysozyme | DL545_RS02910 | Not Available | Positive | 542436 - 545129 | 97019.2 |
| bacterioferritin-associated ferredoxin | DL545_RS02915 | Not Available | Positive | 545298 - 545492 | 7363.04 |
| bacterioferritin | DL545_RS02920 | Not Available | Positive | 545564 - 546040 | 18496.2 |
| prepilin peptidase gspo | DL545_RS02925 | Not Available | Negative | 546069 - 546746 | 24840.1 |
| type ii secretion system protein gspm | DL545_RS02930 | Not Available | Negative | 546746 - 547207 | 17234.8 |
| type ii secretion system protein gspl | DL545_RS02935 | Not Available | Negative | 547204 - 548367 | 44550.3 |
| type ii secretion system minor pseudopilin gspk | DL545_RS02940 | Not Available | Negative | 548382 - 549365 | 37648.7 |
| type ii secretion system minor pseudopilin gspj | DL545_RS02945 | Not Available | Negative | 549358 - 549945 | 22232.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





