Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quercetin 2,3-dioxygenase | DL545_RS02350 | Not Available | Positive | 429503 - 430198 | 26341.9 |
| gluconate operon transcriptional repressor gntr | DL545_RS02355 | Not Available | Positive | 430422 - 431417 | 36406.2 |
| gluconokinase | DL545_RS02360 | Not Available | Positive | 431556 - 432083 | 19544.4 |
| gluconate transporter | DL545_RS02365 | Not Available | Positive | 432087 - 433427 | 46402.9 |
| naat family transporter yhgn | DL545_RS02370 | Not Available | Negative | 433484 - 434077 | 21491.9 |
| aspartate-semialdehyde dehydrogenase | DL545_RS02375 | Not Available | Positive | 434270 - 435373 | 40020.2 |
| 1,4-alpha-glucan branching enzyme | DL545_RS02380 | Not Available | Positive | 435646 - 437832 | 84341.4 |
| glycogen debranching protein glgx | DL545_RS02385 | Not Available | Positive | 437829 - 439802 | 73541.5 |
| glucose-1-phosphate adenylyltransferase | DL545_RS02390 | Not Available | Positive | 439820 - 441115 | 48700.4 |
| glycogen synthase glga | DL545_RS02395 | Not Available | Positive | 441115 - 442548 | 52825.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





