Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor rpoh | DL545_RS02245 | Not Available | Positive | 410638 - 411492 | 32470.6 |
| branched chain amino acid abc transporter substrate-binding protein livj | DL545_RS02250 | Not Available | Positive | 411764 - 412867 | 39096.6 |
| type ii toxin-antitoxin system antitoxin atar | DL545_RS02255 | Not Available | Positive | 413017 - 413283 | 9940.87 |
| type ii toxin-antitoxin system toxin acetyltransferase atat | DL545_RS02260 | Not Available | Positive | 413290 - 413817 | 19692.8 |
| aspartate 1-decarboxylase autocleavage activator panm | DL545_RS02265 | Not Available | Negative | 413814 - 414197 | 14492.3 |
| high-affinity branched-chain amino acid abc transporter substrate-binding protein livk | DL545_RS02270 | Not Available | Positive | 414621 - 415730 | 39380.9 |
| high-affinity branched-chain amino acid abc transporter permease livh | DL545_RS02275 | Not Available | Positive | 415778 - 416704 | 32970.4 |
| branched chain amino acid abc transporter permease livm | DL545_RS02280 | Not Available | Positive | 416701 - 417978 | 46286.2 |
| high-affinity branched-chain amino acid abc transporter atp-binding protein livg | DL545_RS02285 | Not Available | Positive | 417975 - 418742 | 28428.7 |
| high-affinity branched-chain amino acid abc transporter atp-binding protein livf | DL545_RS02290 | Not Available | Positive | 418744 - 419457 | 26297.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





