Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | DL545_RS01780 | Not Available | Negative | 311705 - 312604 | 33275.5 |
| helix-turn-helix transcriptional regulator | DL545_RS01785 | Not Available | Positive | 313124 - 313726 | 22605.6 |
| alpha,alpha-trehalase | DL545_RS01790 | Not Available | Negative | 313777 - 315426 | 63718.1 |
| cytochrome c peroxidase | DL545_RS01795 | Not Available | Positive | 315831 - 317228 | 51543.3 |
| glutamate decarboxylase | DL545_RS01800 | Not Available | Positive | 317439 - 318839 | 52688.0 |
| acid resistance transcriptional activator gadx | DL545_RS01805 | Not Available | Positive | 319209 - 320033 | 31455.3 |
| acid resistance transcriptional activator gadw | DL545_RS01810 | Not Available | Positive | 320401 - 321129 | 28025.0 |
| multidrug efflux pump rnd permease mdtf | DL545_RS01820 | Not Available | Negative | 321492 - 324605 | 111567.0 |
| multidrug transporter subunit mdte | DL545_RS01825 | Not Available | Negative | 324630 - 325739 | 39309.4 |
| hypothetical protein | DL545_RS01830 | Not Available | Positive | 325847 - 326125 | 9815.82 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





