Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| a24 family peptidase | DL545_RS26635 | Not Available | Positive | 41472 - 42128 | 24526.8 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | DL545_RS26640 | Not Available | Positive | 42116 - 43552 | 49882.2 |
| ash family protein | DL545_RS27835 | Not Available | Negative | 43549 - 43770 | 7939.4 |
| tyrosine-type recombinase/integrase | DL545_RS26675 | Not Available | Positive | 45186 - 46340 | 44230.6 |
| conjugal transfer protein trae | DL545_RS26680 | Not Available | Positive | 46491 - 47315 | 30911.4 |
| conjugal transfer protein traf | DL545_RS26685 | Not Available | Positive | 47401 - 48603 | 43196.1 |
| histidine phosphatase family protein | DL545_RS26690 | Not Available | Positive | 48663 - 49247 | 21973.4 |
| ash family protein | DL545_RS27100 | Not Available | Positive | 49642 - 49758 | 3983.81 |
| ash family protein | DL545_RS26695 | Not Available | Positive | 49757 - 51511 | 62326.5 |
| plasmid inci1-type surface exclusion protein exca | DL545_RS26700 | Not Available | Positive | 51582 - 52244 | 25756.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





