Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inci1-type conjugal transfer protein trba | DL545_RS26580 | Not Available | Negative | 33103 - 34311 | 46079.1 |
| protein finq | DL545_RS26585 | Not Available | Negative | 34618 - 35400 | 30356.7 |
| quaternary ammonium compound efflux smr transporter suge | DL545_RS26590 | Not Available | Positive | 35596 - 35913 | 10898.0 |
| lipocalin family protein | DL545_RS26595 | Not Available | Negative | 35910 - 36443 | 19976.9 |
| extended-spectrum class c beta-lactamase cmy-42 | DL545_RS26600 | Not Available | Negative | 36537 - 37682 | 41993.6 |
| is1-like element is1b family transposase | DL545_RS26605 | Not Available | Negative | 38135 - 38832 | 26558.3 |
| hypothetical protein | DL545_RS26615 | Not Available | Positive | 38874 - 39188 | 11659.0 |
| type ii secretion system f family protein | DL545_RS26620 | Not Available | Positive | 39201 - 40286 | 40638.8 |
| type 4 pilus major pilin | DL545_RS26625 | Not Available | Positive | 40303 - 40917 | 21290.3 |
| lytic transglycosylase domain-containing protein | DL545_RS26630 | Not Available | Positive | 40927 - 41487 | 20823.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





