Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rpn family recombination-promoting nuclease/putative transposase | DL545_RS26525 | Not Available | Positive | 23114 - 24016 | 34603.1 |
| hypothetical protein | DL545_RS26530 | Not Available | Positive | 24078 - 24284 | 7676.11 |
| helix-turn-helix transcriptional regulator | DL545_RS26535 | Not Available | Negative | 24315 - 24566 | 9909.82 |
| hypothetical protein | DL545_RS27830 | Not Available | Negative | 24600 - 24797 | 7354.13 |
| duf4942 domain-containing protein | DL545_RS26550 | Not Available | Positive | 25146 - 25994 | 32197.6 |
| hypothetical protein | DL545_RS26555 | Not Available | Negative | 26081 - 26416 | 12450.8 |
| inci1-type relaxosome accessory protein nika | DL545_RS26560 | Not Available | Positive | 26650 - 26982 | 12614.3 |
| inci1-type relaxase nikb | DL545_RS26565 | Not Available | Positive | 26993 - 29692 | 103888.0 |
| f-type conjugative transfer protein trbc | DL545_RS26570 | Not Available | Negative | 29730 - 32021 | 86959.0 |
| inci1-type conjugal transfer protein trbb | DL545_RS26575 | Not Available | Negative | 32014 - 33084 | 39467.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





