Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylamine--glycine ligase | DL545_RS23585 | Not Available | Positive | 4535891 - 4537180 | 45957.0 |
| sigma-54-dependent response regulator transcription factor zrar | DL545_RS23590 | Not Available | Negative | 4537177 - 4538502 | 48313.3 |
| two-component system sensor histidine kinase zras | DL545_RS23595 | Not Available | Negative | 4538499 - 4539875 | 50520.1 |
| zinc resistance sensor/chaperone zrap | DL545_RS23605 | Not Available | Positive | 4540113 - 4540538 | 15200.3 |
| duf1481 domain-containing protein | DL545_RS23610 | Not Available | Negative | 4540540 - 4541235 | 26352.9 |
| nucleoid-associated protein hu-alpha | DL545_RS23615 | Not Available | Negative | 4541248 - 4541520 | 9535.51 |
| yjag family protein | DL545_RS23620 | Not Available | Negative | 4541707 - 4542297 | 22613.9 |
| deoxyribonuclease v | DL545_RS23625 | Not Available | Negative | 4542340 - 4543011 | 24673.9 |
| uroporphyrinogen decarboxylase | DL545_RS23630 | Not Available | Negative | 4543021 - 4544085 | 39236.4 |
| nad(+) diphosphatase | DL545_RS23635 | Not Available | Negative | 4544125 - 4544898 | 29690.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





