Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-disulfide reductase dsbd | DL545_RS22765 | Not Available | Positive | 4368249 - 4369946 | 61834.6 |
| transcriptional regulator | DL545_RS22770 | Not Available | Positive | 4369983 - 4370558 | 21932.3 |
| Trna-phe | Not Available | Not Available | Positive | 4370665 - 4370740 | Not Available |
| arylsulfatase | DL545_RS27820 | Not Available | Positive | 4370983 - 4371097 | 4468.34 |
| lysine decarboxylation/transport transcriptional activator cadc | DL545_RS22785 | Not Available | Positive | 4371357 - 4372895 | 57830.1 |
| cadaverine/lysine antiporter | DL545_RS22795 | Not Available | Positive | 4373261 - 4374595 | 46666.8 |
| lysine decarboxylase cada | DL545_RS22800 | Not Available | Positive | 4374675 - 4376822 | 81264.7 |
| dipeptide/tripeptide permease dtpc | DL545_RS22805 | Not Available | Positive | 4376881 - 4378338 | 53043.7 |
| lysine--trna ligase | DL545_RS22810 | Not Available | Positive | 4378575 - 4380092 | 57829.9 |
| type v toxin-antitoxin system toxin ghot | DL545_RS22815 | Not Available | Negative | 4380211 - 4380384 | 6555.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





