Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps export abc transporter permease lptf | DL545_RS22100 | Not Available | Negative | 4239642 - 4240742 | 40360.1 |
| protein ytga | DL545_RS27405 | Not Available | Negative | 4240805 - 4240855 | 1763.19 |
| leucyl aminopeptidase | DL545_RS22105 | Not Available | Positive | 4241009 - 4242520 | 54883.1 |
| dna polymerase iii subunit chi | DL545_RS22110 | Not Available | Positive | 4242778 - 4243221 | 16574.5 |
| valine--trna ligase | DL545_RS22115 | Not Available | Positive | 4243221 - 4246076 | 108198.0 |
| yjgn family protein | DL545_RS22120 | Not Available | Negative | 4246130 - 4247326 | 44846.1 |
| gnat family n-acetyltransferase | DL545_RS22125 | Not Available | Positive | 4247519 - 4248022 | 18593.5 |
| ribonuclease e inhibitor rrab | DL545_RS22130 | Not Available | Negative | 4248068 - 4248484 | 15603.5 |
| ornithine carbamoyltransferase | DL545_RS22135 | Not Available | Positive | 4248646 - 4249650 | 36892.2 |
| hypothetical protein | DL545_RS22140 | Not Available | Negative | 4249707 - 4251302 | 61757.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





