Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1127 domain-containing protein | DL545_RS21640 | Not Available | Negative | 4168882 - 4169046 | 6847.35 |
| plp-dependent aminotransferase family protein | DL545_RS21645 | Not Available | Positive | 4169223 - 4170635 | 53115.8 |
| rpn family recombination-promoting nuclease/putative transposase | DL545_RS21650 | Not Available | Negative | 4170878 - 4171834 | 37094.9 |
| multidrug efflux mfs transporter mdtm | DL545_RS21660 | Not Available | Positive | 4172301 - 4173533 | 44616.1 |
| duf445 domain-containing protein | DL545_RS21665 | Not Available | Positive | 4173574 - 4174854 | 48221.6 |
| double-cubane-cluster-containing anaerobic reductase | DL545_RS21670 | Not Available | Positive | 4174970 - 4176121 | 42812.3 |
| putative 2-hydroxyacyl-coa dehydratase activator yjil | DL545_RS21675 | Not Available | Positive | 4176131 - 4176898 | 27188.7 |
| duf3343 domain-containing protein | DL545_RS21680 | Not Available | Positive | 4176895 - 4177152 | 9655.84 |
| sdia-regulated domain-containing protein | DL545_RS21685 | Not Available | Positive | 4177217 - 4178077 | 31940.0 |
| mfs transporter | DL545_RS21690 | Not Available | Positive | 4178145 - 4179323 | 41259.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





