Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | DL545_RS21015 | Not Available | Positive | 4041137 - 4041796 | 24862.1 |
| co-chaperone djla | DL545_RS21020 | Not Available | Negative | 4041913 - 4042728 | 30581.2 |
| lps assembly protein lptd | DL545_RS21025 | Not Available | Positive | 4042983 - 4045337 | 89661.8 |
| peptidylprolyl isomerase sura | DL545_RS21030 | Not Available | Positive | 4045390 - 4046676 | 47260.5 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | DL545_RS21035 | Not Available | Positive | 4046676 - 4047665 | 35184.9 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | DL545_RS21040 | Not Available | Positive | 4047662 - 4048483 | 30422.0 |
| co2+/mg2+ efflux protein apag | DL545_RS21045 | Not Available | Positive | 4048486 - 4048863 | 13867.6 |
| bis(5'-nucleosyl)-tetraphosphatase (symmetrical) apah | DL545_RS21050 | Not Available | Positive | 4048870 - 4049712 | 31298.4 |
| type 3 dihydrofolate reductase | DL545_RS21055 | Not Available | Negative | 4049790 - 4050269 | 18000.3 |
| glutathione-regulated potassium-efflux system protein kefc | DL545_RS21060 | Not Available | Negative | 4050461 - 4052323 | 67754.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





