Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| propionate--coa ligase | DL545_RS19420 | Not Available | Negative | 3736820 - 3738706 | 69439.8 |
| 2-methylcitrate dehydratase | DL545_RS19425 | Not Available | Negative | 3738746 - 3740197 | 53984.8 |
| 2-methylcitrate synthase | DL545_RS19430 | Not Available | Negative | 3740231 - 3741400 | 43136.6 |
| methylisocitrate lyase | DL545_RS19435 | Not Available | Negative | 3741445 - 3742335 | 32079.4 |
| propionate catabolism operon regulatory protein prpr | DL545_RS19440 | Not Available | Positive | 3742573 - 3744159 | 58634.9 |
| duf1471 family periplasmic protein yaho | DL545_RS19445 | Not Available | Negative | 3744257 - 3744532 | 9895.93 |
| lyse family transporter | DL545_RS19450 | Not Available | Positive | 3744679 - 3745350 | 24825.9 |
| Trna-pseudo | Not Available | Not Available | Positive | 3745602 - 3745682 | Not Available |
| protein yahm | DL545_RS19455 | Not Available | Negative | 3745367 - 3745612 | 8889.07 |
| protein yahl | DL545_RS19460 | Not Available | Negative | 3746024 - 3746839 | 31787.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





