Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| smdb family multidrug efflux abc transporter permease/atp-binding protein | DL545_RS18830 | Not Available | Negative | 3621128 - 3622909 | 65258.6 |
| smda family multidrug abc transporter permease/atp-binding protein | DL545_RS18835 | Not Available | Negative | 3622902 - 3624674 | 66062.4 |
| dna-binding transcriptional regulator decr | DL545_RS18840 | Not Available | Negative | 3624704 - 3625162 | 17438.4 |
| hmp-pp phosphatase | DL545_RS18845 | Not Available | Negative | 3625315 - 3626133 | 30330.6 |
| sgrr family transcriptional regulator | DL545_RS18850 | Not Available | Positive | 3626233 - 3627933 | 64951.1 |
| 7-cyano-7-deazaguanine synthase quec | DL545_RS18855 | Not Available | Positive | 3627998 - 3628693 | 25481.5 |
| long-chain acyl-coa thioesterase fadm | DL545_RS18860 | Not Available | Negative | 3628745 - 3629143 | 15089.2 |
| helix-hairpin-helix domain-containing protein | DL545_RS18865 | Not Available | Negative | 3629237 - 3629608 | 12716.4 |
| peptidylprolyl isomerase | DL545_RS18870 | Not Available | Negative | 3629759 - 3631630 | 68183.8 |
| nucleoid-associated protein hu-beta | DL545_RS18875 | Not Available | Negative | 3631822 - 3632094 | 9226.08 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





