Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hok/gef family protein | DL545_RS00960 | Not Available | Positive | 182029 - 182178 | 5543.0 |
| replication regulatory protein repa | DL545_RS00965 | Not Available | Positive | 182462 - 182719 | 9702.65 |
| repa leader peptide tap | DL545_RS00975 | Not Available | Positive | 182955 - 183029 | 2727.44 |
| arylsulfatase | DL545_RS00980 | Not Available | Positive | 183022 - 183468 | 16535.1 |
| arylsulfatase | DL545_RS00985 | Not Available | Negative | 183468 - 184082 | 20761.1 |
| arginine deiminase | DL545_RS00990 | Not Available | Positive | 184789 - 186009 | 45775.5 |
| carbamate kinase | DL545_RS00995 | Not Available | Positive | 186020 - 186931 | 32331.1 |
| ornithine carbamoyltransferase | DL545_RS01000 | Not Available | Positive | 187016 - 188020 | 37201.9 |
| yfcc family protein | DL545_RS01005 | Not Available | Positive | 188068 - 189471 | 49910.7 |
| arginine repressor | DL545_RS01010 | Not Available | Positive | 189552 - 190031 | 18197.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





