Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-2,3-diacylglucosamine diphosphatase | DL545_RS18455 | Not Available | Positive | 3546455 - 3547177 | 26796.6 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | DL545_RS18465 | Not Available | Positive | 3547295 - 3547804 | 17781.3 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | DL545_RS18470 | Not Available | Positive | 3547801 - 3548868 | 39470.4 |
| carbamate kinase | DL545_RS18475 | Not Available | Negative | 3549005 - 3549898 | 31659.1 |
| duf2877 domain-containing protein | DL545_RS18480 | Not Available | Negative | 3549895 - 3550710 | 29709.9 |
| duf1116 domain-containing protein | DL545_RS18485 | Not Available | Negative | 3550721 - 3551980 | 44951.6 |
| acyl-coa synthetase fdra | DL545_RS18490 | Not Available | Negative | 3551990 - 3553657 | 58636.4 |
| ureidoglycolate dehydrogenase | DL545_RS18495 | Not Available | Positive | 3553974 - 3555023 | 37940.2 |
| allantoate deiminase | DL545_RS18500 | Not Available | Positive | 3555045 - 3556280 | 45690.7 |
| (s)-ureidoglycine aminohydrolase | DL545_RS18505 | Not Available | Positive | 3556291 - 3557076 | 28718.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





