Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine carboxypeptidase daca | DL545_RS17960 | Not Available | Positive | 3453054 - 3454265 | 44446.5 |
| duf493 family protein ybed | DL545_RS17965 | Not Available | Positive | 3454376 - 3454639 | 9827.92 |
| lipoyl(octanoyl) transferase lipb | DL545_RS17970 | Not Available | Positive | 3454740 - 3455381 | 23884.0 |
| ybef family transcriptional regulator | DL545_RS17980 | Not Available | Positive | 3455640 - 3456593 | 35934.4 |
| lipoyl synthase | DL545_RS17990 | Not Available | Positive | 3456802 - 3457767 | 36073.8 |
| twin-arginine translocase subunit tate | DL545_RS17995 | Not Available | Negative | 3457868 - 3458071 | 7024.71 |
| deaminated glutathione amidase | DL545_RS18000 | Not Available | Negative | 3458200 - 3458988 | 28683.0 |
| fluoride efflux transporter crcb | DL545_RS18005 | Not Available | Positive | 3459081 - 3459464 | 13796.2 |
| transcription antiterminator/rna stability regulator cspe | DL545_RS18010 | Not Available | Negative | 3459518 - 3459727 | 7463.84 |
| lipid iv(a) palmitoyltransferase pagp | DL545_RS18015 | Not Available | Negative | 3459902 - 3460462 | 21770.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





