Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit delta | DL545_RS17905 | Not Available | Positive | 3444634 - 3445665 | 38702.0 |
| nicotinate-nucleotide adenylyltransferase | DL545_RS17910 | Not Available | Positive | 3445667 - 3446308 | 24529.3 |
| arylsulfatase | DL545_RS17915 | Not Available | Positive | 3446332 - 3446739 | 15735.6 |
| is1-like element is1a family transposase | DL545_RS17920 | Not Available | Negative | 3446756 - 3447453 | 26455.2 |
| arylsulfatase | DL545_RS17930 | Not Available | Positive | 3447508 - 3447720 | 7964.7 |
| ribosome silencing factor | DL545_RS17935 | Not Available | Positive | 3447980 - 3448297 | 11582.9 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | DL545_RS17940 | Not Available | Positive | 3448301 - 3448768 | 17342.1 |
| peptidoglycan dd-transpeptidase mrda | DL545_RS17945 | Not Available | Positive | 3448799 - 3450700 | 70874.6 |
| peptidoglycan glycosyltransferase mrdb | DL545_RS17950 | Not Available | Positive | 3450703 - 3451815 | 40478.6 |
| endolytic peptidoglycan transglycosylase rlpa | DL545_RS17955 | Not Available | Positive | 3451826 - 3452914 | 37502.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





