Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DL545_RS00845 | Not Available | Positive | 166065 - 166352 | 11007.2 |
| duf932 domain-containing protein | DL545_RS00850 | Not Available | Positive | 166470 - 167291 | 31619.8 |
| transglycosylase slt domain-containing protein | DL545_RS00855 | Not Available | Negative | 167588 - 168178 | 22443.2 |
| conjugal transfer relaxosome dna-binding protein tram | DL545_RS00860 | Not Available | Positive | 168511 - 168894 | 14518.3 |
| conjugal transfer transcriptional regulator traj | DL545_RS00865 | Not Available | Positive | 169081 - 169770 | 27063.2 |
| conjugal transfer relaxosome dna-bindin protein tray | DL545_RS00870 | Not Available | Positive | 169869 - 170264 | 15184.2 |
| type iv conjugative transfer system pilin traa | DL545_RS00875 | Not Available | Positive | 170297 - 170662 | 12769.3 |
| type iv conjugative transfer system protein tral | DL545_RS00880 | Not Available | Positive | 170677 - 170988 | 11904.7 |
| type iv conjugative transfer system protein trae | DL545_RS00885 | Not Available | Positive | 171010 - 171576 | 21225.5 |
| type-f conjugative transfer system secretin trak | DL545_RS00890 | Not Available | Positive | 171563 - 172291 | 25628.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





